Abstract
Introduction
The understanding of desmoplastic small round cell tumor has evolved significantly since its establishment in a 1991 series documenting its unique multiphenotypic differentiation.1,2 They have a predilection for young adult male patients, and are relentlessly aggressive with poor overall survival even in the face of multimodal therapy.3–5 Cytogenetically, they are defined by a recurrent and pathognomonic t(11;22)(p13;q12) translocation. This manifests in a chimeric RNA transcript between coding regions for EWSR1 on 22q11 and WT1 on 11q13.
The description of DSRCT as a primary malignancy of intraosseous tissues is remarkably uncommon. This has only been recorded definitively, to our knowledge, on four separate occasions (calvarium, ilium, tibia, and femur; possibly a fifth which appeared more likely centered in the soft tissues and extending into the bones of the hypothenar eminence).6–10 This lethal tumor should be included in the ever-broadening differential of primitive round blue cell tumors of bone - especially considering their multifactorial overlap with the more common osteogenic sarcomas.
As a subset of DSRCT, the overall clinical trajectory of intraosseous tumors appears comparable to those of their intraabdominal and soft tissue counterparts – distant metastases and high mortality. Herein, we describe the clinicopathologic, histologic, and molecular features of the fifth known primary intraosseous DSRCT, with widespread metastatic disease at presentation. The diagnostic challenges and differential are highlighted, along with a review of the available literature on primary DSRCT of bone.
Materials and Methods
Specimen Processing and Immunohistochemistry
Biopsy tissue was processed and embedded per standard histologic protocols after decalcification in EDTA for DNA/RNA preservation. Immunohistochemical staining was performed on 4 μm-thick sections cut from these formalin-fixed, paraffin-embedded tissue blocks, using Leica Bond® automated stainer.
Fluorescent In Situ Hybridization (FISH)
The specimen was sent to a reference laboratory for break-apart FISH testing.
Oncoplus Next Generation Sequencing
A representative FFPE section was selected for DNA and RNA NGS on the University of Chicago Medicine OncoPlus (UCM-OncoPlus) panel, a hybrid-capture panel targeting 1213 cancer-associated genes. Tissue was processed per the protocol described by Kadri et al. 11
Case Report
A healthy 18 year-old Hispanic male with a prior history of bipolar depression (on lithium, escitalopram, and aripiprazole) presented to the emergency room with a one-year history of progressively worsening left knee and thigh pain, relieved by analgesics and intermittent icing. There were no systemic symptoms or prior trauma/injury to the area. An x-ray at the time revealed no apparent abnormalities and he was discharged with a diagnosis of “runner’s knee”. Six months later, he was referred to our orthopedic clinic without improvement. Physical exam demonstrated effusion and tenderness to palpation over the medial femoral condyle, but otherwise no deficiencies in motor ability or neurovascular function. The skin overlying the lesion was intact without erythema or ecchymosis.
X-ray at that time revealed a poorly marginated, predominantly radiodense lesion involving the distal femur, extending from the diaphysis into the metaphysis. Additionally, a mineralized soft tissue mass extended medially from the femoral cortex by less than one centimeters. There was no evidence of a fracture. MRI showed the lesion to involve most of the mid- to distal femur over a span of 17 cm. It was composed of apparently separate discontinuous foci over this expanse, although these were favored to be microscopically confluent. All were dark on T1 and bright on T2-weighted images. The minor soft tissue component on x-ray was also evident on MRI, and located on the medial supracondylar flare (Figures 1 and 2). The aggressive radiologic features as well as clinical scenario in an adolescent male were concerning for osteosarcoma, Ewing sarcoma, osteoblastic lymphoma, or a benign process such as an atypical infection.

Left Femur Coronal MRI.

Distal Left Femur Axial MRI.
Histomorphology
The patient subsequently underwent an open biopsy of the lesion. Standard histologic sections (post-EDTA decalcification) showed a very crushed but cellular neoplasm infiltrating through both the intramedullary bone and adjacent soft tissues. It was composed of sharply defined clusters with irregular contours, to trabeculae of small cells embedded in a dense desmoplastic stroma (Figure 3). The cells had monomorphic, slightly enlarged round to ovoid nuclei. The chromatin was condensed to finely granular and open, with occasional small nucleoli. Cytoplasm was scant and amphophilic with indistinct borders. Neither rhabdoid cells, rosettes, nor glands were identified. The surrounding stroma consisted of bland fibroblasts and myofibroblasts elaborating a dense collagenous to focally myxoid matrix, with sparse chronic inflammation. There was some bony remodeling with osteoblastic rimming, and neoplastic osteoid was not identified (Figure 4).

Morphologic features.

Immunohistochemical features.
Accordingly, these biopsy fragments raised a rather broad preliminary histologic differential diagnosis, including Ewing sarcoma, Ewing-like tumor (BCOR-CCNB3, CIC-DUX4 fusions), non-Hodgkin’s lymphoma, small cell or osteoblastic osteosarcoma, and solid alveolar rhabdomyosarcoma.
Immunohistochemical and Molecular Workup
Diffuse EMA and keratin staining (CAM5.2, AE1/3), weak, focal membranous/cytoplasmic positivity for CD99, and negativity for FLI-1 and ERG argued against a diagnosis of Ewing sarcoma (Figure 3). Absence of definitive osteoid along with unequivocally positive keratins (CAM5.2, AE1/AE3) and EMA eliminated osteosarcoma from the differential diagnosis. Desmin showed patchy punctate paranuclear reactivity, but the completely negative myogenin rendered the diagnosis of alveolar rhabdomyosarcoma unlikely. Additionally, S100, CD45, CD56, synaptophysin, chromogranin, caldesmon, GFAP, and neurofilament were negative. Morphology and immunologic polyphenotypia, as evidenced by differentiation into epithelial (diffuse cytokeratin and EMA), mesenchymal (paranuclear desmin), and neural (focal NSE) supported a preliminary diagnosis of DSRCT. Stromal staining for SMA and CD34 implied a fibroblastic/myofibroblastic phenotype of the associated desmoplasia. N-terminus WT-1 IHC (C-terminus IHC not available) was not completely negative but rather showed weak, punctate cytoplasmic and paranuclear staining.
Subsequent break-apart FISH assay (performed to expediently corroborate the suspected diagnosis in order to begin treatment) confirmed rearrangement of the EWSR1 gene. Subsequent in-house RNA sequencing revealed a fusion between exon 7 of EWSR1 and exon 7 of WT1, which preserved the proper reading frame at the junction point. DNA Next Generation Sequencing did not identify any additional pathogenic mutations. Variants of uncertain significance (VUS) included loss of CTCF and TSC2, an RB1 variant (c.1306C > A, p.Q436 K, VAF 46%), and a PIK3R1 variant (c.398T > A, p.I133N, VAF 52%).
Clinical Follow-up
The patient underwent a staging PET/CT to evaluate for metastatic disease and also possible presence of an intraabdominal primary. The study revealed widespread axial and appendicular skeletal, calvarial soft tissue, mediastinal, intrapulmonary, and supraclavicular/pulmonary hilar nodal metastases. A 25 mm pericardial effusion was present. Intraabdominally, there was an avid focus in the pancreatic tail (1.1 cm with a standardized uptake value [SUV] of 4.56 – representing a replaced splenic hilar lymph node) and the adrenal (0.6 cm with an SUV of 4.95). Given the comparatively lower SUV than the primary distal femur lesion (SUV 5.63), comparatively smaller size than the dominant femoral lesion, and location, these were deemed metastatic deposits rather than primary tumors. There was no additional evidence of intraabdominal, peritoneal, or mesenteric involvement.
Chemotherapy was initiated with standard sarcoma-based therapy consisting of alternating cycles of vincristine/doxorubicin/cyclophosphamide with ifosfamide/etoposide. As surgical resection of the primary femoral tumor was not feasible, he also received radiation to that area. He presented with new-onset ventricular tachycardia four months after treatment initiation, and was found to have an intermyocardial metastasis. At that time, however, his primary femoral and other areas of metastatic disease (lungs, soft tissue) appeared overall improved. Chemotherapy plan was changed to Irinotecan/Temador but these were discontinued secondary to bowel obstruction/ileus. Five months post-diagnosis, his chemotherapy regimen was changed to oral cyclophosphamide, temsirolimus IV and vinorelbine IV. At the time of this publication, the patient showed stable disease at both primary and metastatic sites.
Discussion
This report is an important addition to the scarce literature on primary DSRCT of bone. In the molecular frontier of diagnostic bone and soft tissue pathology, this case and those prior illustrate some contextual pitfalls even with careful integration of available evidence.
DSRCTs show a unique and hallmark divergence into epithelial (EMA, cytokeratins), neural (NSE), and mesenchymal/myogenic (vimentin, desmin) phenotypes. Originally speculated to be of “mesothelioblastic” differentiation by virtue of their predominantly intraabdominal and serosal localization and immunophenotypic similarities to fetal mesothelium, they are also documented to arise in a variety of nonmesothelial sites, including pleura, subcutis, and orbit.12–15 Morphologically - in addition to its descriptive eponym – DSRCT can have significant cellular pleomorphism (up to frank anaplasia), perinucleolar clearing, spindled or signet-ring cellular features, “zellballen”-like or papillary architecture, and conspicuous absence of desmoplasia.16–20
The canonical EWSR1-WT1 fusion in DSRCT is inconsistent at the transcript and protein levels due to different breakpoints in the involved genes, corresponding to variable functional levels of the expressed protein.16,21–25 The most frequently reported genomic alteration in DSRCT (of any site) is a fusion of exon 7 of EWSR1 to exon 8 of WT1, rendering a composite of the N-terminus of the EWS protein to the C-terminus of WT1. The latter explains nuclear immunoreactivity exclusively with antibodies to the C-terminus of the WT1 protein. (As such the “N-terminus” antibody employed at most academic institutions is typically not applied towards this diagnosis.) As we illustrate here, nonspecific cytoplasmic or paranuclear positivity with the N-terminus antibody should not confound the diagnosis.
Alternative breakpoints for this fusion span the breadth of the EWSR1 and WT1 coding regions with consequent variation in the gene segments included in the chimeric transcript. In keeping with this, our case harbored in-frame breakpoints within exon 7 of each gene, a heretofore unreported variation. Although the more common EWSR1 exon 7 breakpoint was detected via both break-apart FISH and RNA Oncoplus fusion panel, these inherent molecular deviations could represent cryptic rearrangements undetectable by standard molecular methods (due to lack of primer or epitope coverage).
The past two decades are peppered with reports of primary intraosseous DSRCT (Table 1). Of the documented five (including ours), four were males with ages spanning 6 to 33 years. Prior history of trauma was specifically denied in a majority. Three arose in the diaphysis of the long bones (tibia, femur) with two of these extending to the metaphysis and one continuing into the epiphyseal plate. The two others arose in the flat bones (ilium, calvarium). All save one showed cortical breach; three of these had adjacent soft tissue extension. Maximum tumor size on imaging (when provided) ranged from 7 to 17 cm. All appeared aggressive with a prebiopsy radiologic differential including (most commonly) osteosarcoma, Ewing sarcoma, and lymphoma. Only two others, (in addition to ours), had metastatic disease at presentation (one widespread, the other with pulmonary nodules). Molecular confirmation in all cases (save ours) was performed via reverse transcriptase polymerase chain reaction. The only specified transcript in this context was for the calvarial DSRCT reported by Kachaturov, et al, in which exon 10 of EWSR1 was fused to exon 8 of WT1. All were treated with a variable combination of resection (save the calvarial tumor) and neoadjuvant/adjuvant chemotherapy (most frequently doxorubicin, cyclophosphamide, etoposide, ifosfamide, and/or vincristine). Treatment for the femoral and calvarial tumors included myeloablative and focused radiation, respectively. Overall, the behavior and outcome of these intraosseous DSRCT appear similar to those from the abdominal or extra-abdominal soft tissues.
Review of the literature to date on primary DSRCT of bone.
*Abbreviations: 'Unsp': Unspecified or unavailable; 'NEOD': No evidence of disease'; 'XR': X-ray/plain film
Of course, metastatic disease must be the primary considerations when a rare tumor is encountered in an even more rare anatomic location. The clinical presentation, namely a year-long prodrome of poorly localized leg/knee pain, was more consistent with a primary bone lesion; metastatic disease from an intraabdominal lesion would have declared itself more expediently and in a different distribution. PET uptake in the potential intraabdominal primary sites (replaced splenic lymph node and adrenal, which were not sampled pretreatment) might arguably have been lower that of the femoral tumor because they were comprised mainly by desmoplasia rather than cellular “small round blue cell” elements. This idea was entertained; however, the magnitude of the size disparity between the femoral and intraabdominal lesions, rendered such a consideration unlikely.
Intraosseous nonosteogenic/nonchondrogenic tumors are described in brief case series and defined by the WHO as very uncommon but distinct entities, and equally as aggressive as their soft tissue analogs. From ours and prior reports, DSRCT of bone can appear not only radiographically but also clinicopathologically similar to osteosarcoma and Ewing sarcoma – young patients with destructive lesions of tubular bones, frequently with periosteal reaction, cortical breach, and soft tissue extension. The significance of the soft tissue mineralization on x-ray in this case is unclear; indeed, many radiologic studies pertaining to DSRCT are understandably restricted to CT and MRI modalities. Intratumoral calcification has occasionally been reported on MRI.26,27
On histology, small round cell tumors of bone have a standard differential diagnosis and workup that usually does not historically include DSRCT. Misconstruing a collagenous background or reactive woven bone for neoplastic osteoid production could lead to a diagnosis of conventional or small cell osteosarcoma (a distinction towards which ancillary tests are unreliable). Osteosarcomas of any subtype can be aberrantly positive for keratins, presenting another interpretive danger. Immunoreactivity for desmin in a small round cell tumor could errantly support the consideration of a solid-type alveolar rhabdomyosarcoma (also rare in bone). And although unlikely in a younger patient, EMA positivity might mimic both metastatic carcinoma and sclerosing epithelioid fibrosarcoma, appearing sclerotic on imaging as well as histology (the latter also harbors EWSR1 rearrangements).
Perhaps the greatest diagnostic hazard resides in the rather promiscuous EWSR1 rearrangement by break-apart FISH, which is the first step in molecular confirmation of a suspected Ewing sarcoma (usually followed by RT-PCR or RNA fusion sequencing to detect FLI-1 or ERG partners) in essentially the exact same clinical and radiologic context. (While most institutions now reflex to sequencing for mesenchymal neoplasms, this is still a relevant cautionary tale towards those for which it is inaccessible.) In fact, early literature on this tumor harbors three cases of DSRCT with underlying EWSR1-ERG and EWSR1-FLI1 fusions, in which the tumor was defined as DSRCT rather than Ewing sarcoma due to otherwise conventional morphologic and multiphenotypic immunohistochemical features.24,28–33 In this or virtually any other context, these fusions would define Ewing sarcoma to those lacking molecular capabilities and/or familiarity with the tumor. The burgeoning use of Next Generation Sequencing and cases such as these emphasize how crucial it is to interpret molecular results in conjunction with other morphologic and immunohistochemical features.
Conclusion
In summary, we describe the fifth case of a primary DSRCT of the distal femur in a teenage boy, Due to the rarity of this site, DSRCT can masquerade as otherwise more common tumors of bone, underscoring future considerations regarding its cognizance and subclassification.
Footnotes
Declaration of Conflicting Interests
The author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.
Funding
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