In individually randomized controlled trials, in addition to the primary outcome, information is often available on a number of covariates prior to randomization. This information is frequently utilized to undertake adjustment for baseline characteristics in order to increase precision of the estimation of average treatment effects; such adjustment is usually performed via covariate adjustment in outcome regression models. Although the use of covariate adjustment is widely seen as desirable for making treatment effect estimates more precise and the corresponding hypothesis tests more powerful, there are considerable concerns that objective inference in randomized clinical trials can potentially be compromised. In this paper, we study an empirical likelihood approach to covariate adjustment and propose two unbiased estimating functions that automatically decouple evaluation of average treatment effects from regression modeling of covariate–outcome relationships. The resulting empirical likelihood estimator of the average treatment effect is as efficient as the existing efficient adjusted estimators1 when separate treatment-specific working regression models are correctly specified, yet are at least as efficient as the existing efficient adjusted estimators1 for any given treatment-specific working regression models whether or not they coincide with the true treatment-specific covariate–outcome relationships. We present a simulation study to compare the finite sample performance of various methods along with some results on analysis of a data set from an HIV clinical trial. The simulation results indicate that the proposed empirical likelihood approach is more efficient and powerful than its competitors when the working covariate–outcome relationships by treatment status are misspecified.
The invention and use of randomization in the design of an experiment was one of the early major advances in statistical inference. Randomized clinical trials are routinely performed with the goal of assessing the effect of a treatment versus a control. A common measure or estimand for evaluating the treatment effect in the primary analysis is the average treatment effect: the difference in mean outcome between the treatment and control. Because of the randomization, one attractive feature of random assignment of treatments is that it naturally leads to an unbiased estimator of the average treatment effect, which is the difference in the average outcomes between those assigned to treatment and those assigned to control. Thus, randomization is considered by many clinicians and (bio)statisticians to be the “gold standard” of clinical study design.
In many randomized clinical trials, extensive covariate data are collected at baseline for each subject prior to a treatment being assigned, such as pretreatment outcome data, data on prior medical history, data on medications and lab results, demographic data, and so on. Although a key characteristic of these covariates is that they are known a priori to be unaffected by the treatment assignment, the covariates can be highly predictive of the outcomes in many scenarios. As a result, the information available in these covariates can be desirable in that it can be used to make estimates more precise and hypothesis tests more powerful by explaining some of the variation in outcomes; this is the so-called covariate adjustment. The aforementioned unbiased estimator of the average treatment effect ignores this covariate information and may therefore lack efficiency and power compared to analyses that involve covariate adjustment.
There is a vast body of literature dealing with covariate adjustment.1–9 While covariate adjustment may increase precision and improve power to detect a treatment effect, considerable debate exists as to whether such adjustment is appropriate.10–13 A major concern of covariate adjustment is the potential compromise of objective inference, resulting from the post hoc selection of covariates and going on a fishing expedition to seek models that yield the most significant treatment effect estimate. Another issue is the potential for biased estimation of treatment effects due to possible misspecification of the associations between the outcome and covariates. Such concerns stem by nature from the standpoint that randomization is necessary for objective inference and that covariate adjustment may inadvertently prompt an accentuation of estimated treatment effects under randomized studies.
To address the aforementioned concerns, there are a number of recent attempts at adjusting covariates objectively in randomized trials. Among others, Tsiatis et al.1 have proposed a systematic approach to the covariate adjustment problem from a semiparametric theory perspective. Their approach allows for a principled and flexible covariate-adjusted analysis that utilizes regression analysis to exploit covariate–outcome relationships by positing two separate working regression models for the data from the treatment and control arms. In two recent related works, Shen et al.14 and Williamson et al.15 have proposed two two-stage estimation procedures for covariate adjustment based on the inverse probability weighting (IPW) method of Horvitz and Thompson16; one key feature of their procedures is its flexibility of allowing data analysts to adjust covariates before seeing the outcome data.
In this paper, we propose an alternative approach to covariate adjustment in the estimation of average treatment effects. Working from the viewpoint that decouples evaluation of the average treatment effect from regression modeling the outcome and covariate data, we consider two unbiased estimating functions. The first one is associated with the standard “unadjusted” treated-minus-control difference in sample means, which does not take covariates into account and thus depends only on the outcome and treatment assignment indicator. The second one is motivated by the desire for exploitation of covariate–outcome relationships to improve on the unadjusted estimator. For the second estimating function, we focus only on the data on (pretreatment) covariate values and treatment assignment, without having to see the outcome data. As a result, these two estimating functions automatically separate modeling of covariate–outcome relationships from estimation of the average treatment effect, thus providing another attempt at making objective covariate adjustment in randomized clinical trials.
The aforementioned two unbiased estimating functions form the basis for making objective inference on the average treatment effect in randomized studies. Since there are more estimating equations than the parameter of interest, we employ the empirical likelihood method to combine these estimating functions, which leads naturally to an empirical-likelihood-based estimator of the average treatment effect. The proposed empirical likelihood estimator objectively adjusts baseline covariates and simultaneously exploits covariate information to enhance desired efficiency gains. There are three attractive features of the proposed estimator: (a) it is at least as efficient as the unadjusted estimator, i.e. the difference in average observed outcomes by treatment status, (b) it is as efficient as the adjusted estimator proposed by Tsiatis et al.1 when separate treatment-specific working regression models are correctly specified, and (c) it is at least as efficient as the adjusted estimator of Tsiatis et al.1 for any given treatment-specific working regression models whether or not they coincide with the true treatment-specific covariate–outcome relationships. Additionally, we demonstrate that when the working covariate–outcome relationships by treatment status are misspecified, (1) the proposed empirical-likelihood-based estimator is more efficient than its competitors theoretically and via simulation, and (2) the proposed empirical-likelihood-based Wald test statistic is more powerful than other existing Wald test statistics via simulation.
As a nonparametric method, empirical likelihood was introduced by Owen17–21 for constructing confidence intervals or regions for the mean and other parameters. In the context of analyzing data from pretest–posttest randomized trials, Huang et al.22 have proposed an empirical likelihood-based approach to estimation of the average treatment effect without and with missing data on the posttest response; this approach incorporates the common baseline covariate information to improve efficiency.
In Section 2, we provide some notations and a brief review of the existing methodology in covariate adjustment. In Section 3, we propose two unbiased estimating functions and study maximum empirical likelihood estimation of the average treatment effect. In Section 4, we study efficiency comparison between the proposed and existing estimators. In Section 5, the proposed methodology is illustrated using a data set from the AIDS Clinical Trials Group (ACTG) protocol: 175.23 Simulation results are presented in Section 6 and concluding remarks are given in Section 7. Theorems and their proofs of the main theoretical results are delegated to the supplementary Web Appendix.
2 Notation and review
Consider a clinical trial where n subjects are randomly sampled from a population of interest and are randomized to an experimental treatment or to a standard or control treatment. Let the treatment assignment indicator D take on value 1 if a subject received the experimental treatment, and value 0 if a subject received the control treatment. Furthermore, let be the randomization probability that a subject is assigned to receive the experimental treatment, so that is the randomization probability that a subject is assigned to receive the control treatment. We are interested in the effect of the treatment D on a continuous or discrete outcome Y. Often, the population of interest is characterized by a vector of pretreatment or baseline covariates, X. Randomization implies that D and X are statistically independent. The observed data from the clinical trial are the independent and identically distributed sample for Let denote the numbers of subjects in the treatment arm, so that is the numbers of subjects in the control arm.
The average treatment effect is defined as the difference of the pair of the treatment-specific mean outcomes, averaged over the entire population
A widely used estimator of θ is the simple difference in sample means for treated and controls without adjustment for the covariate vector X, where and are the averages of the observed outcomes in the treatment and control groups, respectively. Since the estimator is shown to be the least squares estimator of the coefficient α1 for the treatment indicator by specifying a simple linear regression model for the observed outcome as for where is a random error with mean . This well-known phenomenon motivates a common way of estimating θ based on regression methods by specifying a linear regression function for the observed outcome as a function of a set of predictor variables, which includes both the treatment assignment indicator and additional pretreatment covariates (and possibly their interactions if the association between the outcome and covariates varies by treatment status); this gives rise to popular covariate adjustment in the estimation of the average treatment effect θ in randomized clinical trials. Two widely known regression estimators of θ are the least-squares estimated coefficients and of the Di from the analysis of covariance (ANCOVA) model without interactions, i.e. , and from the centered ANCOVA model with interactions, i.e. , where and Write and Under standard regularity conditions, the standard unadjusted estimator and popular adjusted estimators and have been shown to be consistent and asymptotically normal for
The estimators and may be regarded as one-stage estimators of θ in the sense that they are based on models for the regression of Y on both D and X at the same time, thus causing concerns of subjectivity by inevitably linking the effect of treatment to that of the covariates. To objectively incorporate covariate effects into the evaluation of the treatment effect, Tsiatis et al.1 have proposed a principled approach to covariate adjustment from the perspective of semiparametric theory, which allows to model covariate effects by treatment status. To describe their principled adjustment methodology, let denote a working regression model for the treatment-specific conditional expectation where is a vector parameter for For the postulated model let be a consistent estimator of based on the treatment-specific data for Tsiatis et al.1 have proposed to estimate θ by
and have shown that the estimator is consistent and asymptotically normal for any posited models and and is semiparametrically efficient if both models are identical to the true covariate–outcome relationships by treatment status, i.e. and where β00 and β10 denote the true values of and
In the pretest–posttest setting, Huang et al.22 have proposed a semiparametric procedure for the estimation of θ using the method of empirical likelihood. Their approach is to first estimate and separately, say, by and using two possibly different sets of constraints that incorporate baseline covariates for adjustment and efficiency gains, and then estimate θ by taking their difference to obtain The large sample distribution of follows from the large sample properties of and .
Recently, Shen et al.14 have applied the IPW method to covariate adjustment in randomized studies. Let be a correctly specified parametric model for the propensity score that encompasses the true treatment assignment probability i.e. for all x, where ξ0 is the truth of Then the IPW estimator of θ proposed by Shen et al.14 is given by
where is the maximum likelihood estimator of For the logistic propensity score, is asymptotically equivalent to and hence is at least as efficient as Similarly, Williamson et al.15 have proposed an inverse probability-of-treatment weighting estimator of θ with weights and replaced by the standardized weights and respectively.
3 Methodology
We now consider an alternative semiparametric approach to covariate adjustment using the method of empirical likelihood. Let be a vector function of X and a vector parameter. Typically, the components of are treatment-specific working regression functions for and Since by randomization and
we are motivated to consider two unbiased estimating functions
where Note that the first estimating function involves data only on outcome and treatment assignment, whereas the second estimating function involves data only on covariates and treatment assignment. Therefore, and automatically separate adjustment for covariate effects from estimation of the treatment effect. Note also that is a vector function whose dimension equals 1 or 2 in most cases. If we posit the same working regression model for both and then the dimension of is 1. On the other hand, if we posit different working regression models for and then the dimension of is 2. In addition, if we postulate multiple models from robustness considerations for each treatment-specific conditional expectation with then the dimension of may be more than 1.
Our focus of attention in this paper is on the estimation of the average treatment effect θ, the parameter of interest. Since the number of estimating functions in equation (4) is at least as large as 2 (depending on the dimension of ), which is greater than the dimension 1 of θ, the question arises as how to combine the two estimating functions in equation (4) to estimate The empirical likelihood method of Owen17–18 and Qin and Lawless19 provides an effective way of combining unbiased estimating functions when the number of estimating functions exceeds the number of parameters of interest. Considering the fact that the estimating functions and also depend on the nuisance parameters and m, we study a pseudo-empirical likelihood approach to estimating To this end, let be an estimator of β such that the components of β are estimated using the treatment-specific data for and let and Moreover, write Throughout this paper, let denote the truth of so that Furthermore, let represent the probability limit of and When the components of pertain to working regression models that coincide with the true treatment-specific covariate–outcome relationships, we have and .
Let then To implement the pseudo-empirical likelihood estimation of θ, we first estimate by and then maximize the nonparametric likelihood subject to the constraints , where are nonnegative jump sizes with total mass unity. For fixed θ, an application of the Lagrange multipliers method shows that the maximum value of LF is attained at where is determined by
After profiling the pi’s, the profile log pseudo-empirical likelihood function of θ is given by where
Let denote the maximum pseudo-empirical likelihood (MPEL) estimator of θ, which maximizes Theorem 1 summarizes the large sample results of ; this theorem and its proof are given in the supplementary Web Appendix.
The asymptotic expansion of in Theorem 1 provides a revealing insight into the potential efficiency gain by employing the empirical likelihood method for covariate adjustment in randomized trials; we will discuss the efficiency comparison of with other competitive estimators in Section 4. To make inference for θ, the asymptotic variance of can be consistently estimated by
where for C is a small sample “correction factor” described below, and
As in Tsiatis et al.,1 we take if we posit the same working regression model with q parameters (excluding the intercept) for both and and take when we posit separate working regression models with qk parameters (exclusive of intercepts) for The asymptotic normality of in Theorem 1 implies that a level Wald confidence interval for the average treatment effect θ is given by where satisfies with To test the null hypothesis that the average treatment effect is zero against the alternative hypothesis that the average treatment effect differs from zero: versus we can employ the Wald test statistic and reject the null hypothesis at level α if
We close this section by discussing the optimal choice of which is an arbitrary and user-specified vector function. Since the components of specifies working regression models for the treatment-specific outcome–covariate relationships, there can be many different possible choices for Theorem 2 in the supplementary Web Appendix identifies the optimal choice of which minimizes the asymptotic variance of over all choices of The proof of Theorem 2 is also given in the supplementary Web Appendix.
4 Efficiency comparison
To compare the proposed MPEL estimator with other existing estimators, we employ the notion of influence functions. For an exposition on influence functions, see, for example, Tsiatis.24
We first compare with the standard unadjusted estimator It can be shown that the influence function of is identical to
Furthermore, according to Theorem 1, the asymptotic expansion of in equation (A.1) of the supplementary Web Appendix implies that the influence function of is equal to
where S12 and S22 are defined in equation (A.2) of the supplementary Web Appendix. Let
denote the linear space spanned by and let represent the projection of onto the space Since is orthogonal to the linear space Λ, it can be shown after some algebra that
This implies that is the residual from the projection of onto the space We can now deduce from the theory of influence functions that the asymptotic variance of is less than or equal to that of
Therefore, is asymptotically at least as efficient as for any vector function whether or not the components of correctly identify the true treatment-specific conditional expectations and
Second, we compare with the regression estimators and According to Tsiatis et al.,1 the influence functions of and are, respectively, given by
where and
When or when the covariance between the outcome and covariates is the same for both the treatment and control groups, i.e. it is seen that and possess the same influence function and are thus asymptotically equivalent. If we choose for all then it can be shown after some algebra that
In this case, we have and hence and are asymptotically equivalent. Also in this case, since the second term in belongs to the space Λ in equation (7), we have
Therefore, we conclude that when for all and are asymptotically equally efficient and at least as efficient as unless or whether or not the true and are linear in X.
Third, we compare with the adjusted estimator in equation (2). For the postulated working regression model for and for it follows from expressions (A6) and (A7) of Tsiatis et al.1 that the influence function of is given by
If we choose and then the influence function of equals
Since the second term in belongs to the space Λ in equation (7), we have
Consequently, is asymptotically at least as efficient as for each given treatment-specific working regression model
When both and correctly specify the true treatment-specific outcome–covariates relationships, so that and for it can be shown after some algebra that
which implies that and Therefore, we conclude that if correctly specifies for both k = 0 and then and are asymptotically equivalent and thus equally efficient. On the other hand, if incorrectly specifies for either k = 0 or or both, then is asymptotically at least as efficient as
Next, we compare with the estimator proposed by Huang et al.22 Since the proposed semiparametric method imposes a single set of constraints simultaneously on both treatment-specific working regression models for treatment and control arms, it simultaneously estimates the treatment-specific outcome means and thus gives rise to that is, according to equation (A.1) of the supplementary Web Appendix, asymptotically at least as efficient as for any given treatment-specific working regression models, where the treatment and control group means are estimated separately using two possibly different sets of constraints. Nevertheless, when both treatment-specific working regression models are correct, and are asymptotically equivalent.
Finally, we compare with the IPW estimator in equation (3). To this end, we consider a general class of enlarged propensity score models, , that contains the true treatment assignment probability such that for all x, where with being the truth, is a link function, and is a smooth function of for each x. It is seen from the proof of Theorem 1 of Shen et al.14 that the influence function of is given by
where
If we choose and then it can be shown after some algebra that
where stands for the first-order derivative of It follows from these facts that when is chosen to be the vector of the first-order partial derivatives of and have the same influence function and hence are asymptotically equivalent with If, in addition, the vector function also contains treatment-specific working regression models, then it can be shown that is asymptotically at least as efficient as
For the special case of the logit link function and we have and for all In this case, and the inverse probability-of-treatment weighting estimator of Williamson et al.15 are asymptotically equivalent.
5 Application
In this section, we revisit data from n = 2139 patients enrolled in ACTG Protocol 175,23 a study that was designed to evaluate whether treatment of HIV infection with one drug (monotherapy) was the same, better than, or worse than treatment with two drugs (combination therapy) in HIV-infected individuals with CD4 + T cell counts from 200 to 500 per cubic millimeter (a healthy person usually has 800–1200 CD4 + T cells/mm3). The three different drugs used and evaluated in the ACTG Protocol 175 (ACTG 175) study, either in combination or alone, were zidovudine (ZDV), didanosine (ddI), and zalcitabine (ddC), all of which are nucleoside analogs that serve as reverse transcriptase inhibitors. ACTG 175 was a double-blind and phase II/III clinical trial that randomizes patients with equal chance to one of the four antiretroviral regimens: (a) ZDV (600 mg/day) alone, (b) ZDV (600 mg/day) + ddI (400 mg/day), (c) ZDV (600 mg/day) + ddC (2.25 mg/day), or (d) ddI (400 mg/day) alone. The findings of ACTG 175 indicated that patients randomized to the combinations of ZDV + ddI and ZDV + ddC, and ddI monotherapy had better treatment outcomes than those on ZDV monotherapy based on a 50% decline in CD4 + T cell count, AIDS, or death; patients on ZDV monotherapy showed no difference in terms of preventing the onset of AIDS-defining conditions and prolonging survival. As a result, Tsiatis et al.1 have analyzed this data set by forming two groups, the control group composed of n0 = 532 individuals receiving ZDV alone and the treatment group consisting of n1 = 1607 subjects receiving any of the other three therapies. They have compared two group means in Y = CD4 count (cells/mm3) at 20 ± 5 weeks postrandomization with adjustment for 12 baseline covariates, which comprise of five continuous measures: X1 = CD4 count (cells/mm3), X2 = CD8 count (cells/mm3), X3 = age (years), X4 = weight (kg), and X5 = Karnofsky score (0–100 scale that measures ability to perform activities of daily living); and seven indicator variables: X6 = hemophilia (0 = no, 1 = yes), X7 = homosexual activity (0 = no, 1 = yes), X8 = history of intravenous drug use (0 = no, 1 = yes), X9 = race (0 = white, 1 = nonwhite), X10 = gender (0 = female, 1 = male), X11 = antiretroviral history (0 = naive, 1 = experienced), and X12 = symptomatic status (0 = asymptomatic, 1 = symptomatic).
We now apply the empirical likelihood method proposed in this paper to estimate θ in equation (1), along with the use of widely available variable selection techniques in standard software, such as forward selection of covariates. Following Tsiatis et al.,1 we employ two different forward selection procedures, Forward-1 and Forward-2, to develop treatment-specific working regression models for with k = 0, 1 and by fitting separate linear models to the observed data in each treatment arm. The fitted treatment-specific linear models with Forward-1 on linear additive terms only in elements of X are given by
with estimated treatment-specific variances and and treatment-specific coefficients of determination for D = 0 and for D = 1. For the Forward-2 procedure, which allows linear, quadratic, and two-way interaction terms in elements of X, the fitted treatment-specific linear models are selected as
with estimated treatment-specific variances and and treatment-specific coefficients of determination for D = 0 and for D = 1. Note that these two models are slightly different from those selected by Forward-2 in Tsiatis et al.1
For inference on θ, Table 1 presents the unadjusted estimate the proposed empirical likelihood estimate and the semiparametric estimate of Tsiatis et al.1 using the aforementioned treatment-specific linear models selected by the Forward-1 and Forward-2 procedures, their standard errors (SEs), the estimated relative efficiencies calculated as {se ()/se (indicated estimator)}2, and the corresponding 95% Wald confidence intervals. Other estimates of θ, such as , have been given in Table I of Tsiatis et al.1 and are therefore not given here. The results of the analysis given in Table 1 reveal that the proposed estimate is quite similar to the estimate of Tsiatis et al.1 for the Forward-1 and Forward-2 selection procedures, all of which are appreciably larger than the unadjusted estimate For both “Forward-1” and “Forward-2,” the SE of is slightly larger than the SE of The 95% Wald confidence intervals with covariate adjustment yield an estimated average treatment effect of 39–62 CD4 counts per cubic millimeter at 20 ± 5 weeks with 95% confidence, providing strong evidence against the null hypothesis of no treatment effect. By contrast, the unadjusted 95% Wald confidence interval produces an estimated average treatment effect of 33–61 CD4 counts per cubic millimeter at 20 ± 5 weeks. In summary, all of the methods indicate that the mean CD4 cell count at 20 ± 5 weeks is considerably higher in the combination therapy group than in the monotherapy group, and that the proposed empirical likelihood method renders an estimate with lowest SE and hence a Wald confidence interval with shortest width for the difference in mean CD4 count (cells/mm3) at 20 ± 5 weeks between the two treatment groups.
Point and interval estimates of θ for the ACTG 175 data.
Estimator
Estimate
SE
Relative efficiency
Confidence interval
(Unadjusted)
46.810
6.755
1.000
(33.57, 60.05)
(Forward-1)
49.895
5.136
1.730
(39.83, 59.96)
(Forward-2)
51.589
5.066
1.778
(41.66, 61.52)
(Forward-1)
49.873
5.128
1.735
(39.82, 59.92)
(Forward-2)
51.395
5.027
1.805
(41.54, 61.25)
ACTG 175: ACTG Protocol 175; SE: standard error.
6 Simulation studies
In this section we present two simulation studies to compare the performance of the proposed empirical likelihood methods with other existing methods based on 5000 Monte Carlo data sets.
The scenario of the first simulation study is based on the ACTG 175 data analyzed in the last section. As in Tsiatis et al.,1 we consider two settings: and . For each of the n subjects, we generate the continuous baseline covariate vector from a multivariate normal distribution with mean vector and covariance matrix equal to the sample mean vector and covariance matrix of in the data. Furthermore, independent of , we generate for each subject the baseline binary covariates X11,X12 from independent Bernoulli distributions with success probabilities equal to their corresponding sample proportions in the data. Moreover, independent of , the treatment assignment indicator D is generated from the Bernoulli distribution. Finally, conditional on and D = k with k = 0, 1, the outcome variable Y is generated for each subject from a normal distribution with mean equal to the conditional mean in equation (9) and conditional variance equal to for k = 0 and for k = 1. Under this setup, the true value of the average treatment effect is found to be .
For each data set, we calculate the estimates of θ and their corresponding SEs using the methods described in Section 2 and Table 1; we also calculate the “change scores” and “benchmark” estimates and their SEs using the methods described in Tables I and II of Tsiatis et al.1 The simulation results are presented in Table 2, in which relative bias is the bias in absolute value for the unadjusted estimator divided by the bias of the indicated estimator (where each bias is calculated as the average of biases based on 5000 estimates), SE stands for the averages of standard errors based on 5000 estimates, SD represents the sample (Monte Carlo) standard deviation of 5000 estimates, RMSE is the Monte Carlo root mean square error, relative efficiency is the Monte Carlo mean square error of the unadjusted estimator divided by that of the indicated estimator, and coverage probability is calculated as the proportion of 95% Wald confidence intervals covering the true average treatment effect based on 5000 estimates. The results in Table 2 can be summarized as follows:
The bias of the unadjusted estimator is equal to 0.069 for and 0.226 for . The biases of all estimators are negligible, though the “change scores” and unadjusted estimators have the largest bias when and , respectively. In addition, all the SEs work well.
For the performances of , , and are comparable when the treatment-specific working linear models are selected by the Forward-2 procedure, though the proposed estimator has the smallest SDs and RMSEs among all the estimators except for the “benchmark” estimator. By contrast, the ANCOVA I estimator has slightly smaller SD and RMSE than those of , , and for the Forward-1 selection procedure.
For , the proposed empirical likelihood estimate using the Forward-1 selection procedure has the smallest SDs and RMSEs among all the estimators except for the “benchmark” estimator. It is seen that the estimators , and perform better for the Forward-1 procedure than for the Forward-2 procedure.
As expected, the “benchmark” estimator performs the best in terms of SD and RMSE. Overall, by examining the Monte Carlo relative efficiencies, the estimators , , and are quite comparable and are better than the IPW estimator , which is in turn better than the unadjusted estimator and the “change scores” estimator in terms of RMSE.
The Wald confidence intervals produced by all the methods achieve their coverage probabilities close to the nominal confidence level 0.95, though the confidence intervals based on yield coverage probabilities slightly closer to 0.95 than those based on .
In the second simulation study, we consider a randomized clinical trial with two baseline covariates X1 and For each of the n subjects, we generate the baseline covariate vector (X1,X2) from a bivariate normal distribution with means , variances , and covariance Independent of we generate the treatment assignment indicator D from the Bernoulli distribution. Now conditional on (X1,X2) and D = k with k = 0, 1, the outcome variable Y is generated for each subject from a normal distribution with mean equal to and variance equal to 1, where and with and being independent standard normal random variables. In this second simulation scenario, the true value of the average treatment effect is equal to . For the implementation of the estimates , and , we choose two different sets of treatment-specific working regression models for and as
and
where for model I or for model II is estimated by the least squares estimator based on the treatment-specific data for k = 0, 1. Note that model II is correctly specified, whereas model I is misspecified.
Relative bias, SD, SE, RMSE, relative efficiency, and coverage probability based on 5000 simulations using the ACTG 175 data.
Estimator
Rel. bias
SD
SE
RMSE
Rel. eff.
Cov. prob.
(Unadjusted)
1.000
7.090
6.946
7.090
1.000
0.949
Change scores
0.541
5.521
5.499
5.523
1.284
0.952
(ANCOVA I)
0.597
5.240
5.160
5.241
1.353
0.946
(ANCOVA II)
0.904
5.251
5.147
5.252
1.350
0.946
(Forward-1)
0.853
5.247
5.142
5.247
1.351
0.945
(Forward-2)
0.719
5.219
5.084
5.220
1.358
0.944
(IPW)
0.708
5.276
5.320
5.277
1.344
0.953
(Forward-1)
0.658
5.247
5.162
5.248
1.351
0.946
(Forward-2)
0.716
5.219
5.100
5.220
1.358
0.945
(Forward-1)
0.639
5.244
5.149
5.245
1.352
0.946
(Forward-2)
0.713
5.216
5.165
5.217
1.359
0.948
Benchmark
0.582
5.169
5.087
5.170
1.371
0.948
(Unadjusted)
1.000
14.411
14.166
14.413
1.000
0.951
Change scores
3.999
11.582
11.526
11.582
1.244
0.944
(ANCOVA I)
2.648
11.041
10.802
11.042
1.305
0.948
(ANCOVA II)
4.536
11.058
10.791
11.058
1.303
0.946
(Forward-1)
3.012
11.047
10.811
11.047
1.305
0.949
(Forward-2)
2.229
11.051
10.733
11.051
1.304
0.946
(IPW)
1.653
11.137
10.657
11.137
1.294
0.942
(Forward-1)
2.407
11.047
10.824
11.047
1.305
0.949
(Forward-2)
2.068
11.051
10.749
11.051
1.304
0.945
(Forward-1)
2.533
11.037
10.809
11.038
1.306
0.949
(Forward-2)
2.432
11.047
10.881
11.048
1.305
0.948
Benchmark
1.857
10.947
10.856
10.947
1.317
0.951
ACTG 175: ACTG Protocol 175; ANCOVA: analysis of covariance; IPW: inverse probability weighting; RMSE: root mean square error; SD: standard deviation; SE: standard error.
Table 3 reports the simulation results for and , while Table 4 reports the simulation results for and . For each data set, θ and SDs are estimated using the methods described in Section 2 and Table 1. In each case, the simulation replication is 5000. The results in Tables 3 and 4 can be summarized as follows:
The bias of the unadjusted estimator is identical to 0.0029 for , –0.0012 for , 0.0016 for , and 0.0017 for . The biases of all estimators are negligible, and all the SEs work well. Overall, biases are smaller and SEs estimate SDs better for n = 800 than for n = 400.
As expected, the semiparametric estimators , and perform very similarly and significantly better than other competitors in terms of RMSE under model II, i.e. when the treatment-specific working regression models and are correctly specified. We also observe that these semiparametric estimators have smaller RMSEs under model II for than for .
Under model I, i.e. when and are misspecified, the proposed estimator outperforms the estimators and in terms of RMSE. By examining the Monte Carlo relative efficiencies, we observe that has appreciably smaller RMSEs than those of and under model I. Indeed, has at least 25% reduction in their RMSEs for and at least 14% reduction in their RMSEs for , as compared to and .
Under model I, the proposed estimator has considerably smaller RMSEs than those of the other estimators , , and .
The Wald confidence intervals obtained by all the methods attain their coverage probabilities close to the nominal confidence level 0.95. When the sample size is increased from 400 to 800, there is a reduction in coverage error for most confidence intervals.
The performance of the proposed empirical likelihood estimator is comparable or better than those of the existing estimators when the treatment-specific working regression models are correctly specified and are better than those of the existing estimators when the treatment-specific working regression models are misspecified. In the later case, has a noticeable reduction in their RMSEs as compared to other estimators.
Finally, we investigate the powers of the Wald test statistics produced by all the methods via simulation by testing the null hypothesis versus the one-sided alternative hypothesis at significance level 0.025. To this end, we modify the intercept term in the true covariate–outcome relationships by treatment status or for k = 0, 1, so that the true average treatment effect is identical to in the first simulation study and in the second simulation study. For both scenarios with , the achieved significance level and power of each Wald test statistic are calculated as the proportions of rejecting in favor of based on 5000 Monte Carlo data sets. The simulation results are summarized in Table 5 for the first simulation study and in Table 6 for the second simulation study. It is seen that the achieved significance levels of all test statistics are quite close to the corresponding nominal significance levels with the exception of the IPW test statistic , which is notably larger in Table 5 at 0.031, and that the powers of all test statistics are getting larger as θ moves away from 0. For the first simulation study, the powers of , , and are quite comparable and appreciably larger than the powers of the unadjusted test statistic and the “change scores” test statistic, whereas for the second simulation study, the powers of , and are notably larger than the powers of , and the “change scores” test statistic. Our simulation results also reveal that for the second simulation study, the powers of the proposed test statistic are comparable to or higher than those of and when the treatment-specific working regression models are correctly specified and are significantly higher than those of and when the treatment-specific working regression models are misspecified. In summary, our simulation study indicates that in terms of power performances, the proposed empirical likelihood-based Wald test statistic is comparable to or better than the existing test statistics when the working covariate–outcome relationships by treatment status are correctly specified and are superior to and when the working covariate–outcome relationships by treatment status are misspecified.
Relative bias, SD, SE, RMSE, relative efficiency, and coverage probability based on 5000 simulations with sample size , , and . The incorrect working model I and correct working model II are used.
Estimator
Rel. bias
SD
SE
RMSE
Rel. eff.
Cov. prob.
(Unadjusted)
1.000
0.2941
0.2916
0.2941
1.000
0.946
(ANCOVA I)
−3.956
0.2939
0.2904
0.2939
1.001
0.945
(ANCOVA II)
0.483
0.2962
0.2886
0.2963
0.993
0.943
(Model I)
0.132
0.2424
0.2343
0.2434
1.209
0.942
(Model II)
22.775
0.1373
0.1340
0.1373
2.143
0.941
(IPW)
0.447
0.2972
0.2872
0.2972
0.990
0.940
(Model I)
0.239
0.2409
0.2352
0.2412
1.219
0.945
(Model II)
−2.162
0.1379
0.1433
0.1379
2.133
0.955
(Model I)
0.180
0.1792
0.1776
0.1799
1.635
0.947
(Model II)
−10.853
0.1375
0.1432
0.1375
2.139
0.954
(Unadjusted)
−1.000
0.2725
0.2698
0.2725
1.000
0.950
(ANCOVA I)
−0.264
0.2716
0.2678
0.2716
1.003
0.948
(ANCOVA II)
−0.268
0.2727
0.2678
0.2727
0.999
0.948
(Model I)
0.197
0.1896
0.1864
0.1897
1.437
0.946
(Model II)
−19.953
0.1206
0.1207
0.1206
2.260
0.946
(IPW)
−1.190
0.2743
0.2672
0.2743
0.993
0.945
(Model I)
0.342
0.1900
0.1866
0.1900
1.434
0.947
(Model II)
−2.494
0.1215
0.1208
0.1215
2.242
0.944
(Model I)
0.152
0.1627
0.1587
0.1629
1.672
0.943
(Model II)
−1.696
0.1211
0.1204
0.1211
2.250
0.944
ANCOVA: analysis of covariance; IPW: inverse probability weighting; RMSE: root mean square error; SD: standard deviation; SE: standard error.
Relative bias, SD, SE, RMSE, relative efficiency, and coverage probability based on 5000 simulations with sample size , , and . The incorrect working model I and correct working model II are used.
Estimator
Rel. bias
SD
SE
RMSE
Rel. eff.
Cov. prob.
(Unadjusted)
1.000
0.2092
0.2066
0.2093
1.000
0.948
(ANCOVA I)
14.055
0.2092
0.2059
0.2092
1.000
0.947
(ANCOVA II)
0.508
0.2101
0.2052
0.2101
0.996
0.945
(Model I)
0.154
0.1695
0.1660
0.1698
1.232
0.944
(Model II)
−1.497
0.0964
0.0944
0.0964
2.171
0.943
(IPW)
0.520
0.2105
0.2047
0.2105
0.994
0.944
(Model I)
0.214
0.1693
0.1662
0.1695
1.235
0.946
(Model II)
−1.072
0.0967
0.0977
0.0967
2.165
0.949
(Model I)
0.171
0.1224
0.1223
0.1227
1.705
0.947
(Model II)
−1.214
0.0965
0.0976
0.0965
2.169
0.951
(Unadjusted)
1.000
0.1918
0.1909
0.1918
1.000
0.950
(ANCOVA I)
−4.369
0.1910
0.1899
0.1910
1.004
0.951
(ANCOVA II)
−4.259
0.1913
0.1899
0.1913
1.002
0.951
(Model I)
0.378
0.1322
0.1316
0.1323
1.449
0.948
(Model II)
105.544
0.0849
0.0850
0.0849
2.259
0.951
(IPW)
1.223
0.1920
0.1897
0.1920
0.999
0.949
(Model I)
0.457
0.1324
0.1317
0.1325
1.447
0.949
(Model II)
−16.556
0.0853
0.0850
0.0853
2.248
0.950
(Model I)
0.281
0.1130
0.1117
0.1132
1.695
0.945
(Model II)
−11.082
0.0852
0.0849
0.0852
2.251
0.950
ANCOVA: analysis of covariance; IPW: inverse probability weighting; RMSE: root mean square error; SD: standard deviation; SE: standard error.
Achieved significance levels and powers of testing the null hypothesis versus the alternative hypothesis at the level of significance level 0.025 based on 5000 simulations with using the ACTG 175 data.
Estimator
θ = 0
θ = 15
θ = 30
(Unadjusted)
0.025
0.185
0.575
Change scores
0.030
0.254
0.751
(ANCOVA I)
0.027
0.284
0.798
(ANCOVA II)
0.027
0.285
0.798
(Forward-1)
0.026
0.280
0.796
(Forward-2)
0.028
0.289
0.803
(IPW)
0.031
0.294
0.799
(Forward-1)
0.026
0.280
0.796
(Forward-2)
0.028
0.289
0.803
(Forward-1)
0.025
0.282
0.798
(Forward-2)
0.026
0.283
0.796
Benchmark
0.025
0.284
0.797
ACTG 175: ACTG Protocol 175; ANCOVA: analysis of covariance; IPW: inverse probability weighting.
Achieved significance levels and powers of testing the null hypothesis versus the alternative hypothesis at the level of significance level 0.025 based on 5000 simulations with . The incorrect working model I and correct working model II are used.
Estimator
θ = 0
(Unadjusted)
0.023
0.107
0.296
(ANCOVA I)
0.022
0.105
0.297
(ANCOVA II)
0.023
0.106
0.297
(Forward-1)
0.023
0.188
0.587
(Forward-2)
0.023
0.376
0.915
(IPW)
0.023
0.110
0.304
(Forward-1)
0.028
0.198
0.576
(Forward-2)
0.023
0.374
0.914
(Forward-1)
0.026
0.259
0.730
(Forward-2)
0.024
0.377
0.915
ANCOVA: analysis of covariance; IPW: inverse probability weighting.
7 Concluding remarks
In this paper, we have proposed an empirical likelihood estimator of the average treatment effect based on two unbiased estimating functions that separate adjustment for covariate effects from estimation of the average treatment effect. The proposed semiparametric procedure can be viewed as another effort at covariate adjustment with the aim of making objective inference in randomized clinical trials. The proposed estimator is at least as efficient as the unadjusted estimator (difference in treatment-specific sample means) and the adjusted estimators of Tsiatis et al.1 and Huang et al.22 for any given treatment-specific working regression models, and is as efficient as the adjusted estimators of Tsiatis et al.1 and Huang et al.22 when both treatment-specific working regression models coincide with the true treatment-specific covariate–outcome relationships. We have also made efficiency and power comparisons of the proposed estimator with other existing estimators. The simulation results indicate that the proposed empirical likelihood estimator has competitive finite sample properties in terms of bias, RMSE, and power. The proposed semiparametric approach is illustrated using an analysis of the data from the ACTG 175.
Missing outcomes frequently occur in health science studies. It is of interest to adapt the proposed empirical likelihood method to handle outcome missing at random in randomized clinical trials in addition to covariate adjustment. This is an avenue for further exploration.
Supplemental Material
Supplemental material for Empirical likelihood inference in randomized clinical trials
Supplemental Material for Empirical likelihood inference in randomized clinical trials by Biao Zhang in Statistical Methods in Medical Research
Footnotes
Acknowledgements
I am grateful to the editor and two reviewers for a number of helpful comments and suggestions that have improved my original submission.
Declaration of conflicting interests
The author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.
Funding
The author(s) received no financial support for the research, authorship, and/or publication of this article.
Supplemental material
Supplemental material is available for this article online.
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